About this internship
The 4 Month NGS Internship with Live Projects and Certification at Dr. Omics Edu is a 4-month live, mentor-supervised internship in next generation sequencing (NGS) and genomics under NEP 2020. Over eight modules it moves from setup to complete pipelines, ending in a live project. You work on a real dataset and a defined research question, and you finish with a genomics or transcriptomics project from raw reads to interpreted results that you can show to an admissions panel, a guide or an employer.
In this internship you move through linux, r and tool setup for ngs, quality control and pre-processing and rna-seq and dna-seq analysis pipelines, then apply them in your own project. The programme runs live online with 8 modules, so you can ask your mentor questions as you work. It is open to learners at every level, and mentors adjust the pace to your background.
What you will achieve
Linux, R and tool setup for NGS
Quality control and pre-processing
RNA-seq and DNA-seq analysis pipelines
Variant calling and annotation
Differential expression and functional enrichment
A live NGS project with mentor feedback
For careers: Bioinformatics analyst, genomics data analyst, NGS data scientist, research associate, and a stronger profile for M.Sc, MS or PhD admissions in genomics.
Skills you will gain
Linux
FastQC
Trimmomatic
HISAT2/STAR
BWA
SAMtools
GATK
DESeq2
R
Certification
Available
Issued by Dr. Omics Edu
Internship curriculum
8 modules
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M1T1 = Introduction to Bioinformatics
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M1T2 = NCBI Database Overview
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M1T3 = Genbank Database Practical Exercises
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M1T4 = UCSC Genome Browser Overview
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M1T5 = UCSC Genome Browser Hands-on Exercises
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M1T6 = Pubmed Database Introduction
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M1T7 = Clinvar Database Overview
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M1T8 = KEGG Database Overview and Exercises
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M1T9 = Protein Databases (UniProt)
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M1T10 = Protein Databases (PDB)
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M1T11 = Online BLAST Introduction and Exercises
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M1T12 = Standalone BLAST Setup and Exercises
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M1T13 = Standalone BLAST Advanced Exercises
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M1T14 = Multiple Sequence Alignment with ClustalW
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M1T15 = Multiple Sequence Alignment with MEGA
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M2T1 = Overview and Installation of Linux
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M2T2 = Basic Linux Commands
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M2T3 = Advanced Linux Commands
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M2T4 = Package Management using Repository
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M2T5 = Package Management using Source Code
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M3T1 = Introduction to Python
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M3T2= Data Types
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M3T3= String Handling
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M3T4= Data Structure
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M3T5=Control Structure
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M3T6 = Function
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M3T7= File Handling
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M3T8= Data Manipulation
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M3T9= Data Visualization
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M3T10= Biopython
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M4T1 = Introduction and Installation of R
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M4T2= Data Types in R
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M4T3= Data Structure
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M4T4= File Handling
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M4T5=Control Structure
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M4T6 = Function
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M4T7= Package Management
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M4T8= Data Manipulation
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M4T9= Data Visualization
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M4T10= Statistical Analysis
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M6T1= Introduction to NGS and DNAseq
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M6T2= Basic Terminologies in NGS
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M6T3= Understanding of SRA database
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M6T4= Tools installation in Linux for Variation Calling
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M6T5= Quality control
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M6T6= Trimming of Reads
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M6T7= Indexing of Genome and Alignment of Reads
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M6T8= Variation calling using GATK
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M6T9= Variant Effect Prediction(VEP)
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M6T10= Variation Visualization (IGV)
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M7T1=Introduction to RNAseq and it’s basic terminologies
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M7T2=Tools installation in Linux for Gene Expression analysis
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M7T3=Quality control and Trimming of reads
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M7T4=Indexing of Genome and Alignment of Reads
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M7T5=Normalization of Data (Cufflinks)
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M7T6=Merging of Data and Differential expression of genes
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M7T7=Understanding of DEG results
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M7T8=Annotation of DEG
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M7T9=Functional and Pathway Enrichment Analysis
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M7T10=Network Analysis
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NGS- DNA Seq or RNA Seq Data Analysis
What you need to start
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Basic understanding of Biology
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Fundamental knowledge of Genetics
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Interest in Molecular Biology
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Basic computer skills
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No prior programming experience required
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Passion for genomics research and bioinformatics
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Suitable for beginners as well as intermediate learners
Who this internship is for
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B.Sc, M.Sc, B.Tech, M.Tech and PhD students in biotechnology, genetics, microbiology, biochemistry, life sciences or bioinformatics, plus early-career researchers.
