Cytoscape Hands-On Bootcamp
Master Biological Network Visualization & AI-Enhanced Data Integration
Course Description
Unlock the power of Biological Network Analysis in this comprehensive, project-based bootcamp. This course provides a deep dive into Cytoscape, the industry-standard open-source platform for visualizing complex molecular interactions. You will learn to transform raw "omics" datasets—including genomics, proteomics, and transcriptomics—into high-impact, publication-ready network maps. We integrate modern AI-driven plugins and Machine Learning workflows to automate pattern recognition and functional enrichment. Through hands-on labs, you will master Visual Styles, layout algorithms, and the Cytoscape App Store to extend your analytical capabilities. By the end of this bootcamp, you will be able to perform advanced Pathway Analysis and Topological Clustering, making you a vital asset in any bioinformatics or drug discovery pipeline.
What You'll Learn
How to import data from STRING, Reactome, and WikiPathways.
Mastering the Visual Mapping of expression data (e.g., fold-change to color).
Performing Functional Enrichment Analysis using the stringApp.
Identifying disease modules through ClusterMaker and MCODE.
Utilizing AI algorithms for predictive network modeling and link prediction.
Curriculum
No modules added yet.
