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Instructor Name

Dr.Omics

Category

Core Courses

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Course Requirements

  • Motivation to Learn: A strong desire to engage with and understand the material.
  • Basic Knowledge: Familiarity with biology and molecular biology concepts.
  • Interest in Technology: Eagerness to learn about the latest technologies in Next-Generation Sequencing (NGS).
  • Software: Free software will be utilized, so no additional software purchases are necessary.
  • Hardware: A laptop with a minimum of 4GB RAM and 100GB of hard disk space.

Course Description

  • Introduction to Genomics: Explore the study of genomes, focusing on their organization, function, and evolutionary aspects.
  • Fundamental Concepts: Cover essential topics such as DNA structure, replication mechanisms, and genetic variation.
  • Genomic Technologies: Understand advanced technologies like next-generation sequencing and genome editing, revolutionizing genomic research.
  • Genome Analysis Methods: Explore methods for genome annotation, assembly, and analysis to decode genetic information effectively.
  • Applications in Various Fields: Investigate the diverse applications of genomics in medicine, agriculture, forensics, and conservation efforts.
  • Bioinformatics Tools and Databases: Gain proficiency in using bioinformatics tools and databases crucial for genomic data analysis and interpretation.

Course Outcomes

  • Understand genomics: Learn genome organization, function, and evolution.
  • Master DNA concepts: Study DNA structure, replication, and genetic variation roles.
  • Use advanced technologies: Gain skills in next-gen sequencing and genome editing applications.
  • Analyze genomes: Develop proficiency in annotation, assembly, and data interpretation.
  • Explore genetic insights: Investigate GWAS and comparative genomics for evolutionary understanding.
  • Apply genomics practically: Use knowledge in medicine, agriculture, forensics, and conservation.

Rules & Regulations

  •  Attendance and Participation: Maintain a minimum of 75% attendance. Regular assessments and attendance contribute to performance evaluation.
  •  Discipline: Maintain punctuality and respect in live classes. Engage actively and interact respectfully with instructors and peers.
  • Course Fee Payment: Pay course fees on time to avoid suspension or cancellation of access.
  • Assignments: Complete assignments sincerely and submit them on time.
  • Feedback and Communication: Maintain open communication with instructors and provide constructive feedback.
  • Certification: A certificate will be awarded upon course completion.

Course Curriculum DOWNLOAD BROCHURE

1 Introduction to NGS and DNAseq
1 Hour


2 Basic Terminologies in NGS
1 Hour


3 Understanding of SRA database
1 Hour


4 Tools installation in Linux for Variation Calling
1 Hour


5 Quality control
1 Hour


6 Trimming of Reads
1 Hour


7 Indexing of Genome and Alignment of Reads
1 Hour


8 Variation calling using GATK
1 Hour


9 Variant Effect Prediction(VEP)
1 Hour


10 Variation Visualization (IGV)
1 Hour


1 Introduction to MIcroarray
1 Hour


2 Introduction to Microarray
1 Hour


3 Data Downloading
1 Hour


4 Microarray Pipeline upto Normalization
1 Hour


5 Microarray Pipeline till DEG
1 Hour


6 Annotation of DEG
1 Hour


7 Encrichment Analysis
1 Hour


8 Network Analysis
1 Hour


9 Volcano Plot
1 Hour


10 Heatmap
1 Hour


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GENOMICS CORE COURSE ( 1 MONTH )

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